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View Structure Prediction Details

Protein: mps-2
Organism: Caenorhabditis elegans
Length: 159 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mps-2.

Description E-value Query
Range
Subject
Range
CE39022 - status:Confirmed UniProt:Q7KNR1 protein_id:AAR12970.2
206.0 [0..12] [158..123]
gi|187033665, gi... - gi|39586930|emb|CAE62865.1| Hypothetical protein CBG07048 [Caenorhabditis briggsae], gi|187033665|em...
gi|157753946 - gi|157753946|ref|XP_001680685.1| Hypothetical protein CBG07048 [Caenorhabditis briggsae AF16]
170.0 [0..21] [159..21]

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Predicted Domain #1
Region A:
Residues: [1-159]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPDRRLAIVS FHSLFIYSSF DKMSETKKNV LLSLHSLSSL IHVAMFYFLL VQWSKADNPV  60
   61 LTHFQIFCLV IIGIGFLIIL ILIFSIFKSE MKSDSHARRF FHIWPLVHIA LSTAYQLFTQ 120
  121 IVISHWKTYQ IPILYSSYAT TVSVCIHLVL HSMAVFWKV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle