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View Structure Prediction Details

Protein: CE19329
Organism: Caenorhabditis elegans
Length: 301 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE19329.

Description E-value Query
Range
Subject
Range
gi|39579516, gi|... - gi|39579516|emb|CAE56341.1| Hypothetical protein CBG24013 [Caenorhabditis briggsae], gi|187040564|em...
371.0 [0..3] [298..34]

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Predicted Domain #1
Region A:
Residues: [1-301]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKILMIVSVL IILYFVLKPK SLKGFNPDGF IKPFISYAPS FFTAPDNKLI ACEIRKSMSQ  60
   61 LTLNMMCLLY NETQYLQDKN NFTNTWETST RKCTSETNFV TPSDSLKNDK DAVRFVFVRD 120
  121 PFRRFVSMYL NKCVVEKRCF DCETDMRCIA KKTYESFVEI QNNETKAAGI EYVEAHAAPT 180
  181 TWNCKFNEGV ENWELLPMDS DLKDRISSAA KLADILRKQG VRDTLVEQIY KDILTTETAH 240
  241 STHKWTKRLE AEKQVREDPI VREYLHKIYL YDYLLFPFDR SVLDPEYRDI NSISYLKKFS 300
  301 K

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.24
Match: 2ov8A
Description: No description for 2ov8A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle