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View Structure Prediction Details

Protein: CE19113
Organism: Caenorhabditis elegans
Length: 198 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE19113.

Description E-value Query
Range
Subject
Range
CE21354 - status:Partially_confirmed UniProt:Q9N2S5 protein_id:AAF60927.1
284.0 [0..2] [197..26]
gi|157769389 - gi|157769389|ref|XP_001676515.1| Hypothetical protein CBG14364 [Caenorhabditis briggsae AF16]
gi|39597845, gi|... - gi|39597845|emb|CAE68537.1| Hypothetical protein CBG14364 [Caenorhabditis briggsae], gi|187027850|em...
272.0 [0..14] [198..159]
gi|50731105 - gi|50731105|ref|XP_417168.1| PREDICTED: similar to vitelline membrane outer layer protein I [Gallus ...
205.0 [0..5] [196..150]

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Predicted Domain #1
Region A:
Residues: [1-198]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLLLLLLPC LWTTIIADRI ELQSARVTNW GDWQEWKRCR DGQFVHAVNL KYEQRQHSGD  60
   61 DTALNAIALF CKNIGGDFNK QNEIKSGEGA WGEWQGDNIC PNNLLIIGFA LQSNPDEGKG 120
  121 DDVGANNFAA FCGPPHGARN KDIELLGNAM SWGTWTGDHF CPDGFAVCGI QTQIERSQGG 180
  181 NGDDTALNNV NIECCRIP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 47.69897
Match: 1vmoA
Description: Vitelline membrane outer protein-I (VMO-I)
Matching Structure (courtesy of the PDB):

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