YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE18871
Organism: Caenorhabditis elegans
Length: 511 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE18871.

Description E-value Query
Range
Subject
Range
gi|37747787, gi|... - gi|37747787|gb|AAH60013.1| MGC68615 protein [Xenopus laevis], gi|148235435|ref|NP_001083229.1| hypot...
633.0 [0..6] [511..1]

Back

Predicted Domain #1
Region A:
Residues: [1-511]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQRHVSVGC FSTFSEAEAK SSEEWKTSTK LEALGSMEGE LAHLLSTCKP ETLNHNKTEL  60
   61 SGFRNLFARF LRAKPTVDWS KIEPLPEGAI RPYKSLGHVV DKELIASQLR KLVVVKLNGG 120
  121 LGTSMGCKGP KSVISVRNDL TFLDLTMQQI QTLNKTYGVD VPLVLMNSFN TNEDTQKVLK 180
  181 KYANVKVSVH TFSQSQYPRI NRETLLPIVK SLEADDNECW YPPGHGNFYE AFHNSGLLDK 240
  241 FLADGKEYCF LSNIDNMGAT VDLSILNFVL NPSPDQTAPE FLMEVTDKTR ADVKGGTLIQ 300
  301 YEGRLMLLEI AQVPKDYVDE FKSISKFRIF NTNNLWAKLD AMRKIVVENK LEMEVIVNPK 360
  361 HLDRGLDVIQ LETAAGAAIK SFSGAVGVNV PRSRFLPVKK TSDLLLLMSN LYDIDNGSLT 420
  421 LSHQRSFPTT PLVKLGSSFD KVKDYLGRFN GIPDLLELDH LTVSGDVWFG KDVSLKGTVI 480
  481 IIANHGDRID IPPGSILENK IVSGNLRILE H

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 158.0
Match: 2i5kA
Description: No description for 2i5kA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle