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View Structure Prediction Details

Protein: gpdh-1
Organism: Caenorhabditis elegans
Length: 374 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gpdh-1.

Description E-value Query
Range
Subject
Range
gi|99031626 - gi|99031626|pdb|1X0X|A Chain A, Co-Structure Of Homo Sapiens Glycerol-3-Phosphate Dehydrogenase 1 Co...
264.0 [0..19] [373..6]

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Predicted Domain #1
Region A:
Residues: [1-374]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPCQNFDYSY NFNNNSGEDY RKKIAIVGGG NWGSAIACVV GKTVKAQDEV FQPIVSIWCR  60
   61 DSRKPGDLSP SIAETINSTH ENPKYLPGRR IPDNVVATSS LLEACQSAHI LILVVPHQGI 120
  121 PQICDELRGK LQKGAHAISL TKGISSSCEN GEIKMQLISE DIERALGVQC SVLMGANLAG 180
  181 EVADGKFCEA TIGCKSLKNG EELKKVFDTP NFRIRVTTDY EAVELCGALK NIVACAAGFA 240
  241 DGLGWAYNVK SAIIRLGLLE TKKFVEHFYP SSVGHTYFES CGVADLITTC YGGRNRKVAE 300
  301 AFIKSDKPLR VIEQELLKGQ SAQGPPTAQD VYEMLEINEI SEKFPIFASV HKVFTGHHGE 360
  361 QELYDSLRNH PEYD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 70.522879
Match: 1x0vA
Description: No description for 1x0vA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle