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View Structure Prediction Details

Protein: CE18627
Organism: Caenorhabditis elegans
Length: 367 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE18627.

Description E-value Query
Range
Subject
Range
CE19136 - status:Partially_confirmed UniProt:Q9XX13 protein_id:CAA21028.1
193.0 [0..1] [366..1]

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Predicted Domain #1
Region A:
Residues: [1-367]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHISKLLGTL YFRITFKEKP FKILNLPLVV LKNVMNQMNI RSIFKLSKTS KKMYKKLRYA  60
   61 KRNIYKLVID NHFEYDVGNN FPLLYQRIII FEKKNDFVSV YRAMCKKKSS DPSTLAKYSV 120
  121 HFWVEWFYKI DKFGERKLVN SVYKYRNAKK CWKLLTRFDE LFSIDHVDLV IDRSKLFRFH 180
  181 TTLEHPLFRK CDYVEIVKSY SYLTNNDMQF VLNNFNLKNG MLVKCLFWKD FKLELLFKIP 240
  241 RLDIFNAQQF TLDVLIKMDC KVIKLWKHEL GPHHINQFIH LWMAGAMPNL RRLRCNDFCS 300
  301 PWQMDEILRG VEHSKWDGER RARIFCDGIE RINCGIGDDI VRNDGVLATV FYINRCVDFL 360
  361 VWHDNKF

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.08
Match: 1fqvA
Description: Skp2; Cyclin A/CDK2-associated p19, Skp2
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle