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View Structure Prediction Details

Protein: nol-5
Organism: Caenorhabditis elegans
Length: 487 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nol-5.

Description E-value Query
Range
Subject
Range
gi|77748280 - gi|77748280|gb|AAI06292.1| LOC398558 protein [Xenopus laevis]
529.0 [0..1] [457..1]

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Predicted Domain #1
Region A:
Residues: [1-407]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVLFEVAAG YAVFKLSNEK KLKNVDNIWE EFSTAEKAQE NLQLVSFKKF KTTAGAVEAT  60
   61 SEITEGKLSK TLKKLLKSSV DETEKLAVGD AKLGNLIKEK LSLNCVHDSS INELMRGVRA 120
  121 HIEDLLAEHK EEMNAMNLAV AHSLARYKVK FNPEKIDTMI VQAVSLLDDL DKELNNYVMR 180
  181 VREWYGWHFP ELGKTIQDHQ AYAKIIKAIG MRQNCINTDL SSILPEELEE KVKEDAEISM 240
  241 GTDISDIDLI HIKGLCDQVI ELSAYRAQLF DYLKNRMTAL APNLTVLLGE LVGARLISHA 300
  301 GSLVSLAKAP ASTIQILGAE KALFRALKTK KDTPKYGLIY HAQLITQAPP KVKGKMARKL 360
  361 AAKCSLATRI DALSDESATN EIGIECRAAL ENVLRTESER GPSKNKS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 86.221849
Match: 2nnwA
Description: No description for 2nnwA was found.

Predicted Domain #2
Region A:
Residues: [408-487]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FGSHRHDKYE FKSETYEYDA SADTPASRKH KRFDDNEEST NAIKKMKIEE VKEEDEAEPE  60
   61 KKKKKKEKKA KKADTDSDEE 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle