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View Structure Prediction Details

Protein: fat-6
Organism: Caenorhabditis elegans
Length: 339 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fat-6.

Description E-value Query
Range
Subject
Range
gi|74200199 - gi|74200199|dbj|BAE22909.1| unnamed protein product [Mus musculus]
249.0 [0..7] [335..36]

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Predicted Domain #1
Region A:
Residues: [1-105]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVKTRSNIA KKIEKDGGPE TQYLAVDPNE IIQLQEESKK IPYKMEIVWR NVALFAALHF  60
   61 AAAIGLYQLI FEAKWQTVIF TFLLYVFGGF GITAGAHRLW SHKSY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [106-339]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KATTPMRIFL MILNNIALQN DVIEWARDHR CHHKWTDTDA DPHNTTRGFF FAHMGWLLVR  60
   61 KHPQVKEQGA KLDMSDLLSD PVLVFQRKHY FPLVILCCFI LPTIIPVYFW KETAFIAFYT 120
  121 AGTFRYCFTL HATWCINSAA HYFGWKPYDS SITPVENVFT TIAAVGEGGH NFHHTFPQDY 180
  181 RTSEYSLKYN WTRVLIDTAA ALGLVYDRKT ACDEIIGRQV SNHGCDIQRG KSIM

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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