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View Structure Prediction Details

Protein: CE18238
Organism: Caenorhabditis elegans
Length: 451 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE18238.

Description E-value Query
Range
Subject
Range
CE09449 - status:Partially_confirmed UniProt:O16215 protein_id:AAB65282.1
385.0 [0..1] [451..1]

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Predicted Domain #1
Region A:
Residues: [1-451]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLRRFPHAE IVSPDVLGEH LKFRNGRETN NRFLKAALTE IQSSYYPDEP KRHGLPTDAI  60
   61 LNIYDKWGNG SFGMILTSNV LVDPTNLEAA GNAIIFKEGD CHERRALFTY WAKLMKQDGA 120
  121 LAVMQISHAG RQTPVFVNPT PWSASDVQLV SAARFTTYGK PKPLSTEQVE TEVVDRFVYA 180
  181 AKFAYECGFD GIQLHGAHGY LLSQFTSPTT NKRVDKYGGS LENRQRIVIE IYDAIRAEIP 240
  241 ASTGFLIGIK TNSVEFQSEG LTLEDAKTMC QVYESKGFDF VELSGGTYEQ LNWTWEREST 300
  301 KKREAFFVEF AEQIRPVFNK TVVYLTGGFR TVSAMINAIS CNATQGIGLG RPITAEPDLP 360
  361 KKILKGRVIS AVQDSFNPND IATTALASGT QMDQMGRTSL EKASGNIMHL ITDFSDGLTV 420
  421 QKFCEALGHH VEQAALDISE GKIPKAIIAF N

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 95.69897
Match: 1ps9A
Description: The Crystal Structure and Reaction Mechanism of E. coli 2,4-Dienoyl CoA Reductase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.50868196926865 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-CH group of donors 0.95357258623775 bayes_pls_golite062009
oxidoreductase activity 0.31588316578653 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle