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View Structure Prediction Details

Protein: CE18159
Organism: Caenorhabditis elegans
Length: 659 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE18159.

Description E-value Query
Range
Subject
Range
gi|7226509, gi|1... - gi|7226509|gb|AAF41647.1| conserved hypothetical protein [Neisseria meningitidis MC58], gi|15677138|...
gi|11282765 - pir||H81102 conserved hypothetical protein NMB1270 [imported] - Neisseria meningitidis (strain MC58 ...
264.0 [0..71] [534..64]

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Predicted Domain #1
Region A:
Residues: [1-310]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNSESQNDD LIDFLVKNDT IRRRNIERAF RLVDRSDFLP ISERKFTRLP SLTSTEPGGP  60
   61 FYPGALRVGA IDIYAKLFDY LDLRKGHSFL HIGTGSGYLS TIAGILLGET GINHGIELYE 120
  121 NLVTYSETCI DQWITTPEAS SVGWARPELK VCDITDVKFL EAHQNRYDRI FVGFVADDSQ 180
  181 LLKRMLGMLN VGGQLVMPRI QGVCRYRRVS KHRTVYDVPG RMTFSPMIRL PKEERISTPT 240
  241 PFESGPRTLT YLARQALRRD IRRHAYNPRV NRQICGSIMV MKGGNTYMDH VQRHQAEQFE 300
  301 ELNRRRQLFD 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.522879
Match: 1tpyA
Description: Structure of the cyclopropane synthase MmaA2 from Mycobacterium tuberculosis
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transferase activity 0.00950662522666201 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [311-525]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PRPIDQLTPA DNQLTDQRTR NHLDDVMDQY LGRNNNPREQ ENNEQNIRNT IADHVRRWNE  60
   61 TRTDVLQEML NWREMQGFTA PRAHLDGANL RNTAPATENR AVQNLLIFFT LRLVFFRFLK 120
  121 ILEFNNFFRL KLRIKTIFNF LKIKISNCVD SEIFHFYFRN VAPAYVLEWT INHDRPRHHR 180
  181 ILSSIARPET PNTPRMEIVM IPNINDPSTT GLVER

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [526-659]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PNGDLSEDEQ ELSDALEEPQ ESPSTSTESQ VSEDEEPCCS TDPASTTSRR RRIRSPKSES  60
   61 AKKPRKSSSP PLDDYLKEMA VRQNHEQRAI HLRQRRNLEI AGADGVYQRI IDELPLPPTL 120
  121 KDYVRLVQHE VVLK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle