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View Structure Prediction Details

Protein: CE18098
Organism: Caenorhabditis elegans
Length: 782 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE18098.

Description E-value Query
Range
Subject
Range
gi|73996936, gi|... - gi|73996936|ref|XP_543753.2| PREDICTED: similar to Protein C12orf11 (Sarcoma antigen NY-SAR-95) isof...
1029.0 [0..1] [744..3]

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Predicted Domain #1
Region A:
Residues: [1-210]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQRDMKTVF LLDRSAKFVE NCNETFDVTI REGPKQKKLQ FEKTIWTWCL EGIFEMHRIL  60
   61 SDVYPRGTLQ LRFALADFMG KMLDTQWTDG FLTREELGEL IETVSRPSEA NTDITPIGGL 120
  121 TMAIEALAVQ SPEQRNYNYD VRYSANKRTA QNSEVIRVTR ELRGLPPLPT VQNAGNLIMY 180
  181 TRLNTQEEME QLQTEIVELV VSRNKIADAP 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [211-433]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SNKTFCPITS LRLFIVNYYA TGDECTVKTH SLQAHPDLPL LKIWVISRKA ADMCDAIHSL  60
   61 LVDAFDLGST TVTKIPMKED NRGSSNYDVE LFHSGKVHAM LKENNLIDTV SKKGDSDKGV 120
  121 TYDTMRLTWT TAPKTKWSLF PYHGAAVPCT TAQAYSRPSA CLTQFVRDGR CVMLDSEKTT 180
  181 ELGMNMHEKL VSHLLIANRG RIFIQEIDFM QKKADRIAGK LKR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [434-551]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PRVLHAPEDP INMNQLRHTY KQLELRFVAK NRMDDNLTEK ETEKWTGLKN SDLKKRFQRI  60
   61 SKNIPCFAAD TFIFNEKVTP KLEPLISLIT KTTLSENDVD KCKQCIVTLY QMKNERQY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [552-614]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VISPESDIKI SSVRNLKDPD EQLRVTFVEL AKHIMKYVTF SEKHKEIYKT YMTTLNVDKL  60
   61 LEV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [615-782]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DLDDDEAVDK MFVKFSFFGK SDTASKTDED EDSSDDEDEE ILKSPALKKL FGYVDARDER  60
   61 KYEELYGQGF KKKKPEVEEK PIVMAKEIKV DIFSNMCDML EVKESKIRRE FVGRETHGNI 120
  121 APLYPQLAEK LERPASPAAT ERGTERVRNT AERGGSGTPP PGGRRNFQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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