| Protein: | cogc-8 |
| Organism: | Caenorhabditis elegans |
| Length: | 743 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cogc-8.
| Description | E-value | Query Range |
Subject Range |
|
|
622.0 | [0..6] | [565..48] |
|
Region A: Residues: [1-81] |
1 11 21 31 41 51
| | | | | |
1 MDSDYIFHNG DDIRNMGLEE MRRQKVLLAS ELKAIDAQIS DLAFNNYGTY ADAGRATHDC 60
61 SKTFGEMRDK TVNLSDQAEE L
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [82-390] |
1 11 21 31 41 51
| | | | | |
1 TSAFVEFRAK AKQLSEEQDL VRKALDKSNP IWELLTLPSR MDICIRAGYY DLAYTLTNYG 60
61 LQLQQQTQLY RNPLIKKVAD HLVEARAYLL EELFNKFAGP LDLAESIKVV NNVRKMPSLT 120
121 ANQLRIAVLQ HRDIYLEKQI LDISGNVDMI VQAIEIYRTS MYDTLVLYLA VFPENEVVRK 180
181 NPNADPRWES WPVLPPNSIL SQWVISNVKK MLDLITKADV KSAVDLSAVW TKLMAMASSF 240
241 GRMGIDFRPL IAGKLTKLIE QRFRQNVQEA TSRLTGSSRD IVMIGIDPAS LPQFETAPDS 300
301 PPVAAAELS
|
| Detection Method: | |
| Confidence: | 3.38 |
| Match: | 2d2sA |
| Description: | Crystal Structure of the Exo84p C-terminal Domains |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [391-471] |
1 11 21 31 41 51
| | | | | |
1 LWDDMTIYTN SVVDALNGLR FILTPVVLST VVVSLRDSIR SILTWLASSH SNSANFSRAV 60
61 RIVCTSVAPF FEKCVAFFFP P
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [472-743] |
1 11 21 31 41 51
| | | | | |
1 ATVSKIFGSS ISKRQYLQFI ELDMKQLAAS CDGAEKIEEI VKPLLQKRTL EEIGLENVLK 60
61 PTKPEEEKTK FFLEETVEDG PGLAEPQEEA SESVKEQETT SELEKKHGTD FETAETQEMV 120
121 SEPVKEHETT SELTKEQEPA FEPEKLHETP PEPMEPQNFG ESEAKAAHNP EAHLELGETS 180
181 ENQEIREQEH KEVVITSTEP EFHEIDLNSA VLIPKIAVEP QLDPISEYLT ELTQDDPIEE 240
241 EEGWGWGDDD GEEQEISSKE VESPKEKCKK DD
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
