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View Structure Prediction Details

Protein: kpc-1
Organism: Caenorhabditis elegans
Length: 760 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for kpc-1.

Description E-value Query
Range
Subject
Range
kpc-1 - Furin like serine protease status:Confirmed UniProt:O17797 protein_id:CAB04086.1
466.0 [0..1] [760..1]

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Predicted Domain #1
Region A:
Residues: [1-508]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNISWYRHC SVRLQLVTLA LFLLLGSASL GSAHIDEEFE DDVTTTISSI ASPMRRTYTN  60
   61 EWAVRIAGGK VEEANRLANK YGYTNLGPII PGDEYYLFRD DRKKSRSSRK TRSLSANQLQ 120
  121 HEEDVMWMEQ QVAKRRVKRG YRRIRRHTDD NDIFEEDDDG TQISKSRNRK HPDPNDPLWT 180
  181 DMWYLNRGEH HSDSTTRMDH NVKEAWDLGY TGKGVVVTIL DDGLERTHPD ISPNYDERAS 240
  241 YDVNDRDNDP MPRYEFSDEN RHGTRCAGEV AAIFNNSLCI VGIAYNANIG GIRMLDGDVT 300
  301 DAVEAASVGH NADYIDIYSA SWGPDDDGRT VDGPAKLTRS AFEKGITMGR KGKGSIFVWA 360
  361 SGNGGKDADS CNCDGYTNSI YTLSISSATE NGNIPWYSEA CSSTLATTYS SGATGEKMIL 420
  421 TTDLHHACTN MHTGTSASAP LAAGIVALAL EANPNLTWRD LQHIVIRTAK PINLRAGDWT 480
  481 TNGVGRNVSH SFGYGLMDAG AMVKLAKI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 45.30103
Match: 2p4eP
Description: No description for 2p4eP was found.

Predicted Domain #2
Region A:
Residues: [509-646]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WKKVDEQHRC RQFYPSRYKR FSNLPEVYRS LQKFPKISRF FQKFLEVSEV HTIFQKFPGT  60
   61 STRFQKFPKI LEIEKMFRNS KKLQVFRNIP NGNRLQLQLY SDGCYGGADE NKVSYVEHVQ 120
  121 AIVTLKAPKR GDLQIYLT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 82.522879
Match: 1p8jA
Description: Furin, C-terminal domain; Furin, N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [647-760]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SPSGTKSTLL TKRARDTSRS GFTDWAFMTT HNWGEQAAGL WILEIDNDGW DDAELVKWEL  60
   61 VLYGTDRETG DFGGQHASPL AVRSVQMEAT SSGTQYSIFH VITLVILTFS QILY

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.35
Match: 1p8jA
Description: Furin, C-terminal domain; Furin, N-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle