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View Structure Prediction Details

Protein: bath-27
Organism: Caenorhabditis elegans
Length: 299 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for bath-27.

Description E-value Query
Range
Subject
Range
bath-7 - status:Partially_confirmed UniProt:O44817 protein_id:AAB94976.1
190.0 [0..1] [299..1]
gi|39579674, gi|... - gi|39579674|emb|CAE56506.1| Hypothetical protein CBG24226 [Caenorhabditis briggsae], gi|187040358|em...
189.0 [0..3] [299..1]

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Predicted Domain #1
Region A:
Residues: [1-299]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNSKKEFVL RFDFKKVWLM KKKDQYTSEE EDHFGIKWWL RVTRDDQFLY VDLEKSGTGS  60
   61 TNFHGNFNVR IESGHGVISE NFKFSGSKSD AEIPSTSDRC ESFKWNKLDY SKYLSIEGHV 120
  121 EIIDMTGYHD FQKRVDFGSD VTRRFADTVL IVRGQRFYVL KQHLALHSPY FKNLLKECTL 180
  181 DSEIQLPDVD TDDFQKYLEI LYGFSTIHDN FVEGILLLGK FFETERIITA CENFLIDKSS 240
  241 KSIRKLFELS NKFHLKKLNK NCVENIKTST ALRLMLPPDV LTIHHTAIVE LFRRSMQFH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 6.0
Match: 2f1zA
Description: Crystal structure of HAUSP
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle