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View Structure Prediction Details

Protein: CE16866
Organism: Caenorhabditis elegans
Length: 443 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE16866.

Description E-value Query
Range
Subject
Range
gi|74184363 - gi|74184363|dbj|BAE25714.1| unnamed protein product [Mus musculus]
346.0 [0..84] [442..483]

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Predicted Domain #1
Region A:
Residues: [1-443]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTKEKKTKK PHNVKSSVVP PKKWKTKKKD KKGTGKLRKT ASNASLKKHG STHKIKKPED  60
   61 ITSDGCPLLL TASDTCANIY AEQLSAPNNL SAKTSTPHKS IEAALTPVAF SPPPATQATQ 120
  121 AMDAPATTKT AVKPTKWKAE DVAVAYIQKL DPGVIRAEYI EACAATKVNI DKDCQLWKKN 180
  181 LQMNQADNYP ILDSTIVKNP AQPDSYVNMS SVIVPHCRYP ILMAQMPKRG FEEEFWRAAF 240
  241 NESVVIMYVL MGTEDEKNDF FPTTMGAYVY YGAMFVNIRK VEKMDEERTR YTIEVLPNGF 300
  301 SNSVMMNVYV HTGWEASGVP VRYANTTRSV VDVMNFVKTS SGTEKMLVVS KNGCGRAGFF 360
  361 LSLGAAFCCL NDNSEPRIGE IVKAIRSQRP NAVDSIKQYA SIYLCFVYYI KKKITIPEGM 420
  421 QQKFDDLKKG IEAIIREDLS IMY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 86.30103
Match: 2b3oA
Description: Crystal structure of human tyrosine phosphatase SHP-1
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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