| Protein: | CE16812 |
| Organism: | Caenorhabditis elegans |
| Length: | 344 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE16812.
| Description | E-value | Query Range |
Subject Range |
|
|
232.0 | [0..20] | [343..336] |
|
Region A: Residues: [1-344] |
1 11 21 31 41 51
| | | | | |
1 MTSSSSEPRD LDAERDAFIK EWTATSQLLY YTVICVSVVT LPALIFMFIV LRKYKKSNYY 60
61 HFLCAIMAGN FVLLATIFSN VISDRNVMIF AGIIPGVVVC KLSAFLVNTS SFFVHWAWVA 120
121 MYVQRFLHVF FPLRSHRAGD KSKEIIGVLF AFSVISQLWT PILITELSVG ADASSGTYCA 180
181 EDPRIFGEIT LRYLIFFECF MTFFLPLVLT VITDFSVLIM RNPCTSKNAF TLISADEIVH 240
241 HESTDEKSPL KIVHKSKIML DIRRRNDAIR RCLLLATVTL LLNLPNYSLQ LIDEFYHFRE 300
301 SEDLADRRRF VRADAIVYII YLLQFPTVPL YMYCLKTDFD RTKL
|
| Detection Method: |  |
| Confidence: | 42.39794 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
