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View Structure Prediction Details

Protein: fat-5
Organism: Caenorhabditis elegans
Length: 333 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fat-5.

Description E-value Query
Range
Subject
Range
gi|5730152 - gi|5730152|emb|CAB52474.1| fatty acid desaturase [Drosophila melanogaster]
251.0 [0..5] [324..43]

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Predicted Domain #1
Region A:
Residues: [1-146]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQIKVDAII SKQFLAADLN EIRQMQEESK KQVIKMEIVW KNVALFVALH IGALVGLYQL  60
   61 VFQAKWATVG WVFLLHTLGS MGVTGGAHRL WAHRAYKATL SWRVFLMLIN SIAFQNDIID 120
  121 WARDHRCHHK WTDTDADPHS TNRGMF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [147-333]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FAHMGWLLVK KHDQLKIQGG KLDLSDLYED PVLMFQRKNY LPLVGIFCFA LPTFIPVVLW  60
   61 GESAFIAFYT AALFRYCFTL HATWCINSVS HWVGWQPYDH QASSVDNLWT SIAAVGEGGH 120
  121 NYHHTFPQDY RTSEHAEFLN WTRVLIDFGA SIGMVYDRKT TPEEVIQRQC KKFGCETERE 180
  181 KMLHKLG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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