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View Structure Prediction Details

Protein: gi|25395639
Organism: Caenorhabditis elegans
Length: 201 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25395639.

Description E-value Query
Range
Subject
Range
gi|7499968 - gi|7499968|pir||T21434 hypothetical protein F26H11.1 - Caenorhabditis elegans
267.0 [0..1] [201..1]

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Predicted Domain #1
Region A:
Residues: [1-107]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESLNEYMDK IINRLKAVNE KDELVDEGMR KLQKCQEKIM KTRIDAQKHI DERHEQQSFE  60
   61 QQLLNKNMFE TEQLEEKLKR LDDENKIGNE REFNNRTSPT SWSNSGF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [108-201]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HPRINYAFFS CILNHFIYYI VLAEDCGFSC DVVVSTGAGL TLARDSSEEE DDDEEDEDDD  60
   61 EEDDEDVEED GQEAEALRFK VFGQNSPFGF TSQS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle