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View Structure Prediction Details

Protein: dph-2
Organism: Caenorhabditis elegans
Length: 476 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dph-2.

Description E-value Query
Range
Subject
Range
gi|73967371 - gi|73967371|ref|XP_537772.2| PREDICTED: similar to diptheria toxin resistance protein required for d...
468.0 [0..7] [429..250]

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Predicted Domain #1
Region A:
Residues: [1-157]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTESAPSAFF TTSTPADHVH EEESSNTGYF ENLPENDIHS FFEIDATSEW IKQGNHQRIA  60
   61 LQFPDSLLPY SEKVTKLIES RFRSESAKKT FVLADTSYRS CCVDEVAAAH ADCTALVHFG 120
  121 EACHSAPTDK IDVKYVLGSM PIFIDQFRME FQNVADQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [158-249]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LTAEHIVLLM DSCFSHEQEK VAAVIKEVLP GNRHVECSLL PSEDVLKQNR QNIYLGREIP  60
   61 SCLRNNQPTD LIFCGFPNSP LLPIWLLSYP SC

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [250-395]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 STVSHFNPIN KTIQHESTRS SRLLRKRLFL VEKLKDADTV GLVVGSVGVD KHREAVKRMR  60
   61 EMCKKAGKKI YVISVGKINV PKLSNFSTDI DVFVLLSCPF GVVLDSSDYF RPVVSYFEAE 120
  121 IALNPAKTWA ADFGWSAEFA AFLEDK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [396-476]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IETEVPDDKA AGDFSLISGK VRVQKTEEEK NGDGPSSVAI YNPGYCNDRT WKGLNDGVST  60
   61 AEDSTKMGEG RSGIAQGYSG K

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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