| Protein: | lin-66 |
| Organism: | Caenorhabditis elegans |
| Length: | 627 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lin-66.
| Description | E-value | Query Range |
Subject Range |
|
|
960.0 | [0..1] | [627..1] |
|
Region A: Residues: [1-105] |
1 11 21 31 41 51
| | | | | |
1 MSYEMNSLFS SNQQPLGGGP PPQQQSQQQQ QPPQSLWSLQ QFSQMGAPDN FGNHAVPFMP 60
61 TLGMLNQYQN PHPLQMVPPQ PLVTPSQVLP PSMAEQQRAD TIHGF
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [106-195] |
1 11 21 31 41 51
| | | | | |
1 GVLTWLSAKA GLITCKDKMI ISFQLKDFCD QMLNDLTSVL RVGFTLSFHA ALNETSEYTA 60
61 TIVSPIYGPD ADVLFANSQE VDLEAANPTP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [196-404] |
1 11 21 31 41 51
| | | | | |
1 PNSKDAYSPA LEQKAIPALL AIFQRHGLQQ IQLSRSFSLH SQMSNCGDDE LFRYVGTSSL 60
61 KRRQFVERRT HLFRLQNDDS IILQYPAVYQ AVYQLASYLL RRGGATSIQS LFDYYGSPDI 120
121 MPEVRSHTGE GRQDFLNLLT AHNWVFALFP NRTYVSVRRN LPNYDYVGFI KQHFQEMDIT 180
181 RSQQMAYGQP PRGIQRTMSA QMGSSFATG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [405-627] |
1 11 21 31 41 51
| | | | | |
1 RPQNLLMQHQ HAMTPAATRS GSLWDSQSSL SQSGNSGDQW SPLFSPSTWS NNTNANPRLT 60
61 SLTPLSSMNE TLLSGVNYNS LLAMPPSAKN ERSIGVQADD FLDRMSYNPI GRTGCTCQCQ 120
121 CGRGGAAIIG NTRGSSSRAS GGSASPPSAD GASQIDRFSP SNHAGSIGDR TLTAAALGVG 180
181 LVDQQPAAPN HDGSANQPQR YYDPFGTADL LNGTRLNSLR IGN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
