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View Structure Prediction Details

Protein: ces-2
Organism: Caenorhabditis elegans
Length: 211 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ces-2.

Description E-value Query
Range
Subject
Range
gi|114581857 - gi|114581857|ref|XP_001152057.1| PREDICTED: chimerin (chimaerin) 1 isoform 6 [Pan troglodytes]
114.0 [0..6] [194..229]
gi|2801478, gi|9... - gi|9626985|ref|NP_056890.1| gag polyprotein [Murine osteosarcoma virus], gi|2801478|gb|AAC82572.1| p...
gi|332196 - gi|332196|gb|AAA46573.1| gag-fos fusion protein [FBR murine osteosarcoma virus]
101.0 [0..7] [180..309]
gi|74196206 - gi|74196206|dbj|BAE33010.1| unnamed protein product [Mus musculus]
98.0 [0..3] [194..136]
FOS_TETFL - Proto-oncogene c-Fos OS=Tetraodon fluviatilis GN=fos PE=3 SV=1
98.0 [0..13] [210..25]
gi|38197370, gi|... - gi|40254775|ref|NP_068608.2| jun B proto-oncogene [Rattus norvegicus], gi|38197370|gb|AAH61862.1| Ju...
98.0 [0..3] [194..136]

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Predicted Domain #1
Region A:
Residues: [1-102]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFHRALSAL FTNQAAVQPL LGSLGFPFND GTSILTTALA AQSGGKKLDT PLGILPFDSL  60
   61 PTTNLLTPTK KIKLEDELCA SPVSSRSSTV SSSHFSSPQR SP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.307 a.77.1 DEATH domain
View Download 0.304 c.47.1 Thioredoxin-like
View Download 0.374 a.74.1 Cyclin-like
View Download 0.368 a.52.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
View Download 0.370 a.74.1 Cyclin-like

Predicted Domain #2
Region A:
Residues: [103-211]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SRKMSVPIPE EKKDSAYFER RRKNNDAAKR SRDARRQKEE QIASKAHALE RENMQLRGKV  60
   61 SSLEQEAAQL RFLLFSKISP ANSEVSCESN DSTETNDSND SKSDSTIEV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 6.0
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle