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View Structure Prediction Details

Protein: CE15167
Organism: Caenorhabditis elegans
Length: 340 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE15167.

Description E-value Query
Range
Subject
Range
gi|99907347, gi|... - gi|99907347|ref|ZP_01315300.1| hypothetical protein Bpse1_03005364 [Burkholderia pseudomallei 1655],...
gi|126442203, gi... - gi|67735298|ref|ZP_00486309.1| COG0513: Superfamily II DNA and RNA helicases [Burkholderia pseudomal...
gi|167901897 - gi|167901897|ref|ZP_02489102.1| DEAD/DEAH box helicase [Burkholderia pseudomallei NCTC 13177]
gi|237811490, gi... - gi|237811490|ref|YP_002895941.1| dead/deah box helicase [Burkholderia pseudomallei MSHR346], gi|2375...
276.0 [0..3] [339..21]

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Predicted Domain #1
Region A:
Residues: [1-340]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFFICLIPG VTKTVKRRVQ QMSIQVIREG RGLVVEAPTG IGKTYAFLIP AIEAALENRQ  60
   61 SNCFESTKPS PSILIMASTS ALVDQLFNRC ELILGLQCMD NVEPIRDIKI DKLVANHPFT 120
  121 KGQCDIAFCT IGKLKATIEC GDVCLDNLKT IILDEADKMI DNCAFVPDIN WILDQLKEEN 180
  181 LENLQSCFFS ATYNKNANGT IALTVLQMRM LGEDDPCKDG PYNETIAIFC ETVQRVTQVT 240
  241 MTLRQLGYNF KPVCSMITKN QQLVTVNDLE FRKIHGVVCT NILARGIDVS SVKHTIIMEM 300
  301 SADFDTYKHR IGRVSISGFL FGFNIGSRPS CAEHEKTSEC 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 68.154902
Match: 2i4iA
Description: No description for 2i4iA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle