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View Structure Prediction Details

Protein: CE14970
Organism: Caenorhabditis elegans
Length: 532 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE14970.

Description E-value Query
Range
Subject
Range
gi|49527412 - gi|49527412|emb|CAG61052.1| unnamed protein product [Candida glabrata]
gi|50291337, gi|... - gi|50291337|ref|XP_448101.1| unnamed protein product [Candida glabrata], gi|49527412|emb|CAG61052.1|...
293.0 [0..49] [524..101]

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Predicted Domain #1
Region A:
Residues: [1-532]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGCIKVIKGA WRLDIGLMIL YQMTLFFSVQ MLFVIFLEYM PKTHCTEDRY CYKLKNKCMS  60
   61 DFDRHSDSDV CPFASTNFDQ CVVAANKTDF YSAQYEYQQD CTGLKYFSSS TSTFLGTLVG 120
  121 NLILGYLSDT IGRRPVYIFS ILLGVPSVIL SAALNDVMSF YIFRFLVGFA IAGTLTVGWT 180
  181 YASEMVIPSR RFRLRTFPNW ANARMMQVGV SWLAGEWRLA SYLCAALSAT VLPMIWYLPE 240
  241 SPVFLEQKKK YKRAERSREK IAGICQLEYE PKAREEMQDL KKITPIKLLK SPVLRTNFLV 300
  301 LCWMWFYVGM SVYITDLNSG DMAENFYVGQ FLCGLVLTVS KIMIGILEPK IPWLGRRCLF 360
  361 ISSQIIAILA YITILTALWT RNKVSWWYTV AYILAYAGQS LCLETCYLSL AELMPTDVRT 420
  421 ISGALMNILM KIGTILASTT KPIKFWYEPL LFIINTIICT GGLIIVWKYL PESKNMNMQL 480
  481 VGQDDIDEDE DDDSNKTEKP SEIPSEATKS VKTSTEATEM ESEVETEKSS TS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.0
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle