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View Structure Prediction Details

Protein: CE14456
Organism: Caenorhabditis elegans
Length: 282 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE14456.

Description E-value Query
Range
Subject
Range
gi|187032392, gi... - gi|39580726|emb|CAE64112.1| Hypothetical protein CBG08721 [Caenorhabditis briggsae], gi|187032392|em...
gi|157748477 - gi|157748477|ref|XP_001669333.1| Hypothetical protein CBG08721 [Caenorhabditis briggsae AF16]
290.0 [0..22] [282..1]
CE40140 - Yeast YIP1 protein like status:Confirmed UniProt:O02335 protein_id:CAB03470.2
278.0 [0..51] [282..1]
gi|94408016 - gi|94408016|ref|XP_990916.1| PREDICTED: similar to Yip1 domain family, member 6 [Mus musculus]
243.0 [0..59] [280..19]
gi|55663298 - gi|55663298|ref|XP_521102.1| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes]
YIPF6 - Yip1 domain family, member 6
237.0 [0..59] [280..2]
YIPF6_RAT - Protein YIPF6 OS=Rattus norvegicus GN=Yipf6 PE=1 SV=1
237.0 [0..59] [280..2]
gi|15214676, gi|... - gi|28603852|ref|NP_776195.1| Yip1 domain family, member 6 [Homo sapiens], gi|15214676|gb|AAH12469.1|...
236.0 [0..59] [280..2]
gi|40742445, gi|... - gi|67541651|ref|XP_664593.1| hypothetical protein AN6989.2 [Aspergillus nidulans FGSC A4], ref|XP_41...
232.0 [0..21] [279..526]

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Predicted Domain #1
Region A:
Residues: [1-105]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEILNLSSKF SLSDKPCQKF IFSLFSAVQN SRFKIISFPE IHQKPLPQEE MNSFGNASVD  60
   61 IDMLEQEMAA EQTANLSGNI AGMSAPKSSS NRRGPMQEVD LDAEF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [106-282]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DTLEEPVWDT VKRDVLTVGA KFTHVVLPHG DKQQLLRDWD LWGPLFICVG LALLLQHNGG  60
   61 TESAPQFTQV FTITFFGSVI VTANIKLLGG NISFFQSLCV IGYCLLPPFV AAVLCSLFLH 120
  121 GIAFPLRLLI TSIGFVWSTY ASMGFLAGCQ PDKKRLLVIY PVFLFYFVVS WMIISHS

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 57.022276
Match: PF04893.8
Description: No description for PF04893.8 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle