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View Structure Prediction Details

Protein: CE13674
Organism: Caenorhabditis elegans
Length: 375 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE13674.

Description E-value Query
Range
Subject
Range
gi|68388302 - gi|68388302|ref|XP_696268.1| PREDICTED: similar to slow myosin heavy chain 1 [Danio rerio]
209.0 [0..1] [375..1941]

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Predicted Domain #1
Region A:
Residues: [1-290]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISKQRQDSD EKPLEEQLEL LQEKIAEMIV TNEATENQLT NLTFESNDVI IYLKKLVEEK  60
   61 DEETARLEEM LEEQRKESDR MFKIHRDNSE LEEKKLKEQI EKLKSEMSIM DTQLGNQHRI 120
  121 ELEIIEMGAK LNSLQGVVDE QEETIRRKEA EERSVKIAAI EQARADLSAE FEQAVAEIRI 180
  181 EASLESKGHT LMNNQVIEHL ELELTRKKQD MLRMEQMLEE KQSELTQEIG KTQEREEENL 240
  241 KLRSLLEKSG QTTEKALKDS KRRLEESENK RKTTLEKYIQ IENELNSKLD 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 18.0
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [291-375]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EALQNSDKCQ KMTSLLEDQL LREQQTRKAT IDSHKAQNKK IEELKVFFKD VLSSEEGLLD  60
   61 EVIKENRNAV FAHLALIISR IPIVR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.0
Match: 2iw5A
Description: No description for 2iw5A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle