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View Structure Prediction Details

Protein: CE13577
Organism: Caenorhabditis elegans
Length: 574 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE13577.

Description E-value Query
Range
Subject
Range
gi|187037842, gi... - gi|39591115|emb|CAE58895.1| Hypothetical protein CBG02142 [Caenorhabditis briggsae], gi|187037842|em...
gi|157768202 - gi|157768202|ref|XP_001675922.1| Hypothetical protein CBG02142 [Caenorhabditis briggsae AF16]
368.0 [0..1] [573..1]

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Predicted Domain #1
Region A:
Residues: [1-470]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLLILLITP VLADIATYGY HPKGANPTLY SPEDSVLQLD EATFNDTIFG AQSGAAGYLV  60
   61 EFYSDWCGHC RAFAPTYKNL AKDVDGWQNI VKIAAINCAD PVNEPVCRSN GVRFFPLIKY 120
  121 FPRDSLNSTE GSQIKPYSTV SEMRGQLTKA VMDDYALNRY PEWPTFDFLK DVVTYGELWN 180
  181 ESSSSANHIA IIFETNQASL TGAQLLLDLS GNRDRLVARR CLKSHPLAEA LKITDFPSLA 240
  241 IFKRGERKPV LIAELRRLLL REIDQFLGKP TDNHLQTIHF SSRKNKTIDC NKNPELCKPN 300
  301 YFVSEVDMLK AMRYALFRES ARTGAPLQAA NLSALYEFTS LLADTFPTTT IEGASDNSTV 360
  361 LHLDRSSRAV RVFSRLRDFI AEKGLEAPIS VEDWQKEFLA AEEEAGHPFP LNTNWEHCAG 420
  421 SSTQYRGYTC GLWTTFHALT VSAFKNWQNK TNDITLPLPP LQSIRDWVGS 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 47.522879
Match: 2b5eA
Description: Crystal Structure of Yeast Protein Disulfide Isomerase
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [471-574]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FFGCNHCRDH FLKMTTDTFK IEANVRRPED VYLYLWKAHN KVNARLHGRE TEDPKFPKYQ  60
   61 FPAKFLCVDC NAKGFLNEDD TQPFLIDYYS RIRPFTNSTL IKSN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.69897
Match: 1oqcA
Description: Augmenter of liver regeneration
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle