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View Structure Prediction Details

Protein: CE13473
Organism: Caenorhabditis elegans
Length: 425 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE13473.

Description E-value Query
Range
Subject
Range
gi|114675079 - gi|114675079|ref|XP_512338.2| PREDICTED: translocase of inner mitochondrial membrane 44 [Pan troglod...
477.0 [0..27] [425..296]

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Predicted Domain #1
Region A:
Residues: [1-240]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSRICGNGI RLTRTRLQFQ PSIVTFRDYS NPAPKRGFLN NLIDNVRDEM QKNKELQEHQ  60
   61 QQLKARMQEL NESDALKDAR KKFEIVEKET LKSSEVVKQK IEELSDHMKK MVHEIQKTEA 120
  121 GKKMTEAGAE ALKQARKAAE HVEKVAEKVG DTEVYKHVST SMKTVKDEID NIADVRMYSR 180
  181 PEALTKRTDG FDLEKERVVE ANDSATDVTL HKDSKWYSGW KNFSESNTYY HKLLDWKIKY 240
  241 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.09
Match: 1jchA
Description: Ribonuclease domain of colicin E3; Colicin E3 translocation domain; Colicin E3 receptor domain
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [241-425]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DESDNMAVRM MRGVTEKIGS VFSGQNEVSE VLTEIHKIDA NFDKQEWLRF CETKIIPNIL  60
   61 EAFIRFDLEV LQSWCHERAY TQLSTVVKEY QKMHFSTKDS RIIDINKVEM ATGKMMEQGP 120
  121 VLIISFQVYM INVTKNADGK VVEGDPDNPK RINHIWVLCR DVEEYNPALA WKLLEVHMQE 180
  181 TPLAL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 55.30103
Match: 2cw9A
Description: Crystal structure of human Tim44 C-terminal domain
Matching Structure (courtesy of the PDB):

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