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View Structure Prediction Details

Protein: atp-4
Organism: Caenorhabditis elegans
Length: 129 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for atp-4.

Description E-value Query
Range
Subject
Range
gi|157763988 - gi|157763988|ref|XP_001674337.1| Hypothetical protein CBG18931 [Caenorhabditis briggsae AF16]
gi|39594298, gi|... - gi|39594298|emb|CAE71876.1| Hypothetical protein CBG18931 [Caenorhabditis briggsae], gi|187024216|em...
183.0 [0..1] [129..1]

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Predicted Domain #1
Region A:
Residues: [1-129]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRAVQSVRS LSTTAACRQD LIQQTFVTKI REIAKNAGNL ANSDPAVKKA LQEELNRLAT  60
   61 KFQLANADVV SKLPTNFEAA KVDSAVQSAL EGQTLASLLE GVKKDHSEYV ASRDAKKAEQ 120
  121 AARNAALKQ

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.8
Match: 2clyC
Description: No description for 2clyC was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle