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View Structure Prediction Details

Protein: klp-15
Organism: Caenorhabditis elegans
Length: 587 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for klp-15.

Description E-value Query
Range
Subject
Range
gi|7228425 - gi|7228425|dbj|BAA92263.2| kinesin like protein-15 [Caenorhabditis elegans]
389.0 [0..1] [587..1]

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Predicted Domain #1
Region A:
Residues: [1-123]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVARRRSGL FRSTIGATPK ITRGRAAAPS TKEANSTTIP RQSAPGGITI GAAARRPPSR  60
   61 LPTPTTPATG RASLPERSAM AKPASCSRPI PTMQSTASRI STLTAASTFR QLRTGRPPPP 120
  121 STQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [124-587]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RSTATSSLKP SVTRARPVAQ KPILPSKMAL LEEKIAQLES AMAEATDFAE HQKSKIQILD  60
   61 GKLEGADRKL ISLQDQLSTL KEVNKAKVEE CEDYRVHNND LRDLLNEKEA ELRKLHNDVV 120
  121 DLRGQIRVAV RVRPLIKSEA DASSSAIEYP AIDTIRINEG SKPGIVVKFE KVFTPVFSQK 180
  181 EVFANVEEFI RSSLHGYNVG LIAYGQTGSG KTHTMRGGNG EEEGIIPRAA AFLFAESRKL 240
  241 ESLGWKFDFS LSFLEVYNNV AYDLLSDRAV VQLRLNDQTV SMIGLSEHTI SNVSDVARLL 300
  301 RVADGGRKTA ATKCNESSSR SHAVYMWKIT AHQPSTGIST SCQLKLVDLA GSERAKESGV 360
  361 SGDQFKEMTN INQSLSILQM CISQQRSQKG HVSYRDSKLT QVLMDCLGRG NSKTMVVVNL 420
  421 NPCNEQATES KRSIEFASKM RSTNIGSAVQ QRTLLGDVSQ MSMN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 78.0
Match: 2ncdA
Description: Kinesin motor Ncd (non-claret disjunctional)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle