| Protein: | nhr-49 |
| Organism: | Caenorhabditis elegans |
| Length: | 477 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nhr-49.
| Description | E-value | Query Range |
Subject Range |
|
|
303.0 | [0..1] | [477..10] |
|
Region A: Residues: [1-118] |
1 11 21 31 41 51
| | | | | |
1 MDLVDPLAEP CAVCGDKSTG THYGVISCNG CKGFFRRTVL RDQKFTCRFN KRCVIDKNFR 60
61 CACRYCRFQK CVQVGMKREA IQFERDPVGS PTSGASLNGT PFKKDRSPGY ENGNSNGV
|
| Detection Method: |  |
| Confidence: | 24.154902 |
| Match: | 2a66A |
| Description: | Human Liver Receptor Homologue DNA-Binding Domain (hLRH-1 DBD) in Complex with dsDNA from the hCYP7A1 Promoter |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [119-477] |
1 11 21 31 41 51
| | | | | |
1 GSNGMGQENM RTVPQSSSVI DALMEMEARV NQEMCNRYRR SQIFANGSGG SNGNDTDIQQ 60
61 GSDSGASAFA PPNRPCTTEV DLNEISRTTL LLMVEWAKTI NPFMDLSMED KIILLKNYAP 120
121 QHLILMPAFR SPDTTRVCLF NNTYMTRDNN TDLNGFAAFK TSNITPRVLD EIVWPMRQLQ 180
181 MREQEFVCLK ALAFLHPEAK GLSNSSQIMI RDARNRVLKA LYAFILDQMP DDAPTRYGNI 240
241 LLLAPALKAL TQLLIENMTL TKFFGLAEVD SLLSEFILDD INDHSTAPVS LQQHLSSPTT 300
301 LPTNGVSPLN PAGSVGSVSS VSGITPTGML SATLAAPLAI HPLQSQDSIL NSEQNNHML
|
| Detection Method: | |
| Confidence: | 48.0 |
| Match: | 2gl8A |
| Description: | No description for 2gl8A was found. |
