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View Structure Prediction Details

Protein: bli-4
Organism: Caenorhabditis elegans
Length: 699 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for bli-4.

Description E-value Query
Range
Subject
Range
bli-4 - endoprotease status:Partially_confirmed UniProt:P51559 protein_id:AAB96757.1
524.0 [0..1] [694..1]

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Predicted Domain #1
Region A:
Residues: [1-118]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRISIGRIAW QILAVLIAVA FTIEHDSICD ESIGACGEPI HTVIRLAKRD DELARRIAAD  60
   61 HDMHVKGDPF LDTHYFLYHS ETTRTRRHKR AIVERLDSHP AVEWVEEQRP KKRVKRDY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.522879
Match: 1kn6A
Description: Prohormone convertase 1 pro-domain
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [119-630]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ILLDNDVHHS NPFRRSVLNR DGTRRAQRQQ PQSPREIPSL PFPDPLYKDQ WYLHGGAVGG  60
   61 YDMNVRQAWL QGYAGRNVSV SILDDGIQRD HPDLAANYDP LASTDINDHD DDPTPQNNGD 120
  121 NKHGTRCAGE VAALAGNNQC GVGVAFKAKI GGVRMLDGAV SDSVEAASLS LNQDHIDIYS 180
  181 ASWGPEDDGK TFDGPGPLAR EAFYRGIKNG RGGKGNIFVW ASGNGGSRQD SCSADGYTTS 240
  241 VYTLSISSAT YDNHRPWYLE ECPSSIATTY SSADFRQPAI VTVDVPGGCT DKHTGTSASA 300
  301 PLAAGIIALA LEANPELTWR DMQHLVLRTA NWKPLENNPG WSRNGVGRMV SNKFGYGLID 360
  361 GGALVNMAKT WKTVPEQHIC TYEYRLANPN PRPIVGRFQL NFTLDVNGCE SGTPVLYLEH 420
  421 VQVHATVRYL KRGDLKLTLF SPSGTRSVLL PPRPQDFNAN GFHKWPFLSV QQWGEDPRGT 480
  481 WLLMVESVTT NPAATGTFHD WTLLLYGTAD PA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 96.0
Match: 1p8jA
Description: Furin, C-terminal domain; Furin, N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [631-699]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QSGDPVYSAT PATSQGVLSR VHQLTSQLCF NFENSQPTEC VCLRVCEPGV IINFQIEKLK  60
   61 KSTKCLIFS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle