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View Structure Prediction Details

Protein: CE11614
Organism: Caenorhabditis elegans
Length: 522 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE11614.

Description E-value Query
Range
Subject
Range
gi|70878103 - gi|70878103|gb|EAN91386.1| trans-sialidase, putative [Trypanosoma cruzi]
gi|71648919 - gi|71648919|ref|XP_813237.1| trans-sialidase [Trypanosoma cruzi strain CL Brener]
227.0 [0..65] [514..696]

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Predicted Domain #1
Region A:
Residues: [1-203]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIVYSILALL CIGSVTSKAV KAKDSCEESK THFFVTDNAS LQSADPIVYK ATSEEECLSA  60
   61 CTKNRDKFDR PIVCHSFTYD HASFSCTIHK EKSAPVGSAQ IENSVGKRYF EKICLSHNIP 120
  121 QQCAQTQFIR VDQSVLVGYA VNMTLTDSIE SCAAQCVQEA DCKSAMYFYE DGECITNKES 180
  181 AMTKPAGFTK EENDKVIYFQ NGC

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.96
Match: 2f83A
Description: No description for 2f83A was found.

Predicted Domain #2
Region A:
Residues: [204-522]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DLNKKNEPTV ETEEVQEEVR PVAHVLISET TPKPDSPVEK VVEEVGEEVK PEMKPEEQFD  60
   61 EKQEETNAQT GEDEEEYEDE EVTEETTEEE VTTTEAPTTT TTTEEPTTEA SAPKRIKAHL 120
  121 HKKIKKHPKN FGSKTYEILK KQETVKKSKI EFPEIEEQEI TEDSADSSRA IEPQEPEETY 180
  181 FSDWSDWTPC TKSNERQVRR RRCLNLRKCL GALMQVQNCP EIIPTSTPQN NEMIRSVVSV 240
  241 DGDDEPIAVD NISVDSAPSS ILPVLNEQVW GHWQGTCQPF ASSQPCNNGF MIGFESRECI 300
  301 AKDPAQCEGP FFRYCQHSC

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.01
Match: 2i1jA
Description: No description for 2i1jA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle