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View Structure Prediction Details

Protein: CE11160
Organism: Caenorhabditis elegans
Length: 437 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE11160.

Description E-value Query
Range
Subject
Range
gi|13517069 - gi|13517069|dbj|BAB40417.1| putative monoamine oxidase A [Cavia porcellus]
201.0 [0..9] [436..1]

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Predicted Domain #1
Region A:
Residues: [1-437]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHWLIIFFLL GKCDGLFMQE NASIAIIGAG FAGLRAAQRF EELGIVYTIF EGSDRIGGRV  60
   61 YSFPYQNGYL QFGAEYINGE DNDIYEIVER KNLLSTSETD KDEFETMVYG KPVHDTFHNI 120
  121 WNRFEITTMA KLEKDAANKG ISMNSVPQRI DFYFEEFKNI TGLDPDEAIV FEKMLKIYKN 180
  181 QFQIEWSASA EDLCLKNFNT WDSGVDSEAT LNNMGFKTIL DELTSKVSKS KMRMLSKVEG 240
  241 LDYTGKFFQS RKMRAIERAG FGSNLKIFLE YEKPWWPLGT TLRISGKIEV NQTTLEDDFM 300
  301 VFEPSSWAKN ILVAWVAGNG PMKIAELSDV QLNEIISKHL TTNLKNIYNI PKIQKIYRHN 360
  361 WITDEFARGS YSYISENTCH SNTDDIKILR DPVLRNRKPI ICFAGEHTDS KMYQTAVGAS 420
  421 RSGLREADRI FNYMRST

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 49.39794
Match: 2bxrA
Description: Human Monoamine Oxidase A in complex with Clorgyline, Crystal Forma A
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle