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View Structure Prediction Details

Protein: mex-3
Organism: Caenorhabditis elegans
Length: 443 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mex-3.

Description E-value Query
Range
Subject
Range
mex-3 - status:Confirmed UniProt:Q95R07 protein_id:AAK73872.1
293.0 [0..32] [443..1]

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Predicted Domain #1
Region A:
Residues: [1-155]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVVSVRPFS MRNEGFSNGH NTWNDAEFWK PMKEEQIAYK LPGAWYYEED TASCSPVSDP  60
   61 EDIAQFLNYR TSIGVQNVTE SVEVPTSEHV AEIVGRQGCK IKALRAKTNT YIKTPVRGED 120
  121 PIFVVTGRLE DVNEAKREID CAAEHFTQIR ASRRH

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.67
Match: 2annA
Description: No description for 2annA was found.

Predicted Domain #2
Region A:
Residues: [156-270]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TQGAHAPGQI TSYVRVPLRV VGLVVGPKGA TIKRIQQDTH TYIITPSRER EPVFEVTGLP  60
   61 HNVEAARKEI ETHIFQRTGN LPETDNDFAG QLAGVSLMVQ KQQQAQQQMQ EAQQQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 12.39794
Match: 2dgrA
Description: No description for 2dgrA was found.

Predicted Domain #3
Region A:
Residues: [271-443]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SMFYRRAFGN SNPFNQKEMS SSPFGMESSL GLDALLRSFP SMRSSLTPES LSGTGLSSRP  60
   61 SLGGGQSAKQ DLPTYDYWGT NNSLNDIMEN EILSRKYDAL SAWSSMGLEK REESPTNGLM 120
  121 SSLKGTSAGF GLLSTIWSGG NMNLSPGSLA SASASPTSST CDHNDHTLVP ING

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle