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View Structure Prediction Details

Protein: CE10650
Organism: Caenorhabditis elegans
Length: 456 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE10650.

Description E-value Query
Range
Subject
Range
gi|110827356, gi... - gi|111615223|ref|ZP_01402289.1| Sugar phosphate permease-like [Verminephrobacter eiseniae EF01-2], g...
213.0 [0..3] [396..298]

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Predicted Domain #1
Region A:
Residues: [1-456]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFKTHIKFV VVTIIYFAHI YFRRLPITLL PLIREEIVLT SDDIGILVSS HALLYTIGRL  60
   61 LFGMASDRYS KVALLLLGLV TCAACSVGLA FSNHLWQMLI AMMLLGIVQG AGWVPATLLV 120
  121 QSWYSKSTYG TMFSILACGS TFAGILQPFS KKFYWRNVEL YTGAGMLVFS IVCFIVLRED 180
  181 NVSPKQTEDD EEPNPEKKKK GGLRTIVGSI VIWHISFVYL FTMEMRTICE TWVQLFLTDS 240
  241 KISPDAFQIT YEIGGLVGTM ASGIVIDLAT RKFDVDATRR VIAVSYTCLM MFSAAGIFEF 300
  301 AELSSIFGFL AGMFVNGSIN VWCMIASQAG FSKIQGTVSA FISFIASSGS MLAGTPLAYL 360
  361 ISVFGWKVFL YIFSVQLVIV LFVSSFRVRL RMDTTENEAS KNEIDDDESS GVCSTVVDSQ 420
  421 RNLTSLNKKT RISMLLALYA TKKIKPFRDV LASNKV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 36.0
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hexose phosphate transmembrane transporter activity 8.42101508058771 bayes_pls_golite062009
glucose-6-phosphate transmembrane transporter activity 8.42101508058771 bayes_pls_golite062009
transporter activity 4.09176719149278 bayes_pls_golite062009
substrate-specific transporter activity 3.59744164024479 bayes_pls_golite062009
transmembrane transporter activity 3.5865018981083 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 3.54194478414824 bayes_pls_golite062009
monosaccharide transmembrane transporter activity 3.5078894802599 bayes_pls_golite062009
sugar:hydrogen symporter activity 2.99050613058546 bayes_pls_golite062009
cation:sugar symporter activity 2.99050613058546 bayes_pls_golite062009
carbohydrate transmembrane transporter activity 2.62141276633776 bayes_pls_golite062009
sugar transmembrane transporter activity 2.47557586092261 bayes_pls_golite062009
ion transmembrane transporter activity 2.21266150105753 bayes_pls_golite062009
solute:hydrogen symporter activity 2.10485633822652 bayes_pls_golite062009
cation transmembrane transporter activity 1.79369588808394 bayes_pls_golite062009
active transmembrane transporter activity 1.59419818573076 bayes_pls_golite062009
binding 1.26757615356623 bayes_pls_golite062009
secondary active transmembrane transporter activity 1.22264637452409 bayes_pls_golite062009
alcohol transmembrane transporter activity 0.924836669821548 bayes_pls_golite062009
polyol transmembrane transporter activity 0.924836669821548 bayes_pls_golite062009
glycerol transmembrane transporter activity 0.812001619402678 bayes_pls_golite062009
symporter activity 0.74591237387473 bayes_pls_golite062009
solute:cation symporter activity 0.74591237387473 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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