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View Structure Prediction Details

Protein: CE10636
Organism: Caenorhabditis elegans
Length: 284 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE10636.

Description E-value Query
Range
Subject
Range
gi|157765186 - gi|157765186|ref|XP_001674936.1| Hypothetical protein CBG04646 [Caenorhabditis briggsae AF16]
gi|187035428, gi... - gi|39589926|emb|CAE60924.1| Hypothetical protein CBG04646 [Caenorhabditis briggsae], gi|187035428|em...
444.0 [0..2] [281..1]
CE10638 - status:Partially_confirmed UniProt:Q20518 protein_id:CAB01193.1
404.0 [0..37] [284..1]
gi|91077864 - gi|91077864|ref|XP_972466.1| PREDICTED: similar to glutaredoxin, grx [Tribolium castaneum]
54.0 [0..200] [262..122]
gi|47218760 - gi|47218760|emb|CAG02746.1| unnamed protein product [Tetraodon nigroviridis]
50.0 [0..176] [262..158]
gi|82705830 - gi|82705830|ref|XP_727131.1| dynein subunit beta, ciliary [Plasmodium yoelii yoelii str. 17XNL]
gi|23482828 - gi|23482828|gb|EAA18696.1| dynein beta chain, ciliary [Plasmodium yoelii yoelii]
47.0 [0..6] [179..1072]

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Predicted Domain #1
Region A:
Residues: [1-185]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMRGVFGKSP EKLKPELESE AGEEDLGVKL TVLRDAMIQM RIQFLQFQSV FKFWDSNEDK  60
   61 FVNDLKALKI IVTVVQNRIE DLRNVASEYI ELQNSQLAKR KLDKFDDILN LIVLEINELE 120
  121 RDNFSIQKVE KLINKLNPFD VPTFETLEED TANPEKLPVS RKATNFPDQL TKQTAQREEE 180
  181 SEIRN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [186-284]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DNSKMENGQA KIYKIFRKPV LLFVNYLEDE QTLSTIQSLS DNQIDYTIFD VSTDSEIRFI  60
   61 SKALSDCETF PQLFVDGAFE PLSNLENLLP KLPKVYTMN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.522879
Match: 1wikA
Description: Solution Structure of the PICOT homology 2 domain of the mouse PKC-interacting cousin of thioredoxin protein
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.142133664747919 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle