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View Structure Prediction Details

Protein: CE09981
Organism: Caenorhabditis elegans
Length: 398 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE09981.

Description E-value Query
Range
Subject
Range
gi|74184363 - gi|74184363|dbj|BAE25714.1| unnamed protein product [Mus musculus]
369.0 [0..30] [384..480]

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Predicted Domain #1
Region A:
Residues: [1-398]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVANNNCGQ MLSDSSESSE PPRAQAGAVF GKKDKGKKAD TKKKNTATEG SKRVKKEKKK  60
   61 DDGEAAKGDP TNKTNMTPAP PQTHPIVEQW VLRALDVGVD KLREEFRGLA KYTRPDMTQV 120
  121 MFNANQSPDI AITKNRYQDV PCQDLSAVKL DQPSPCNYIH ANYVGCPMIP EKRFICAQGP 180
  181 LDQTIDEFWW MVIQNKVEQI VMLCKTVEMG KLKCAQYWPA AQGEKLTLKS GCVVENVSGS 240
  241 KPMERDPEIQ ITMLNLTYSG GQTMSVRHLQ WTEWPDRGVP PCKLTSLELL SAIRGSKVPI 300
  301 VVHCSAGIGR TGTIVAIEYI LEKIAENKPC PPMPELVKAL RDQRAFSIQN DVQYLFIHRV 360
  361 MLNYFLEKYK EKYAALLTAE NVAKYDKFIK DYNAAVGQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 83.69897
Match: 2b3oA
Description: Crystal structure of human tyrosine phosphatase SHP-1
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle