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View Structure Prediction Details

Protein: CE09965
Organism: Caenorhabditis elegans
Length: 648 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE09965.

Description E-value Query
Range
Subject
Range
fbxb-10 - status:Partially_confirmed UniProt:O76637 protein_id:AAC26314.1
184.0 [0..329] [647..33]

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Predicted Domain #1
Region A:
Residues: [1-220]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEFRKSPSPD GDRIELVAIY DHDERIDMND LHRSLTGFRI LTLRISATYD QDIERIAFLP  60
   61 TIDKLTFCKD LLNAYNFQRI IMQSYEGIKA IGSRRTRIKL NDLLAANISF PIFMNVILPD 120
  121 AQLNLFIKYL IAGSNHRLDG FLFAKTPNAA DFNEAAIFKG VNYQPVGGRE AYPEFRNIQF 180
  181 QLHPRTRVFY VTNNNGILAT VYLDIGLRYR IDIFPAGLMS 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 15.522879
Match: PF07735.8
Description: No description for PF07735.8 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [221-318]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SFPLLRLPSN ELTKVLRHMN PIAQLGFSLL SEKSKNRISL LRIFSDEVSI SVCAYKRKEK  60
   61 LTLRLRNSLS SLEVHKCGPD LVIVLQNWSD CTKLDFRR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [319-448]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EMSLRHWIDH CMELATAKRI DELTLSSIKK KHKFGISLLS ERLKNLICSL QVFTTDVEII  60
   61 LRRSIELKIV PLFLVIGQTG QIEISSFTHF FLDNFIWIRP QMSTRNWIDH CLELTNNHRL 120
  121 NKLIVEAGDN 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [449-648]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QEIDMDGFYR SLIGLHIKTL ELKGTYSRSI QLFGSLSNVD TIVLDVELVQ TTDYQRMVVL  60
   61 NHTKLVETRT NRVKFSLNDL LASNASFLQF TNLRIPDTQL NLFLKHWIAG SNQRQEGFSL 120
  121 TKEHDEQSYN QSVILKGIET RPAVRRSEHH KFDEIFTLPQ YSRTLDITNC DGVEATVYFG 180
  181 KSWLFNLGPV TNLCCMLVWG 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 21.119186
Match: PF07735.8
Description: No description for PF07735.8 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle