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View Structure Prediction Details

Protein: CE09737
Organism: Caenorhabditis elegans
Length: 160 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE09737.

Description E-value Query
Range
Subject
Range
CE35521 - status:Partially_confirmed UniProt:O45447 protein_id:CAB03061.2
258.0 [0..7] [158..5]
gi|39581557, gi|... - gi|39581557|emb|CAE58342.1| Hypothetical protein CBG01463 [Caenorhabditis briggsae], gi|187038211|em...
gi|157760203 - gi|157760203|ref|XP_001672444.1| Hypothetical protein CBG01463 [Caenorhabditis briggsae AF16]
244.0 [0..17] [159..15]

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Predicted Domain #1
Region A:
Residues: [1-160]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSNFYFFFF AFLIFLITPT YPLQCHQCGG QENMSKLTKK MFTELNISPD KYYGDCKATS  60
   61 GADVCTNGTF CIKRAKIHRV GFNSINFKWT SYTKGCASVR EDNNQTPSNG CFDLNQKVKK 120
  121 TGYTTERLDC YCDKDFCNSS TAVSMTFTTV FVFFWFYKSI 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.31
Match: 1ywhA
Description: crystal structure of urokinase plasminogen activator receptor
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle