YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE09620
Organism: Caenorhabditis elegans
Length: 402 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE09620.

Description E-value Query
Range
Subject
Range
GCST_THETN - Aminomethyltransferase OS=Thermoanaerobacter tengcongensis GN=gcvT PE=3 SV=1
GCST_CALS4 - Aminomethyltransferase OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM...
gi|214035115, gi... - gi|254478933|ref|ZP_05092294.1| glycine cleavage system T protein [Carboxydibrachium pacificum DSM 1...
412.0 [0..23] [390..8]

Back

Predicted Domain #1
Region A:
Residues: [1-402]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRLVSRSTL LNASRCFSRT AEASAKQTCL IETHKKHGGK LVEFAGYDMP TQYADFSIKE  60
   61 STIHTRKHVS LFDVSHMLQT YITGKDRVAF IESLTTADVQ GLQENSGTLS VFTNEKGGIK 120
  121 DDLIIMKTDK DFLFLVTNAG CIEKDLPYLQ ENAAAWRSKG KDVKIETLDN RGLVAVQGPE 180
  181 MAKVLQEGTD IDLSKLTFMK TTVGKVFGID GCRVTRCGYT GEDGVEISVD PTKAEQLVER 240
  241 LLASQAGSVK LAGLGARDAL RLEAGLCLYG SDIEENTTPI EAGLAFVVAK RRRETLDFPG 300
  301 AEHIVKQLKE KSWPKRRVGL LAPAGRCPRS HLPLIDPLDK CSIGFVTSGC PSPTLGKNIA 360
  361 IAYVDKSHSK IGTKFVVDFG AKQAPVEVVK MPFVPTNYFT GK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 104.0
Match: 1wsrA
Description: Crystal Structure of Human T-protein of Glycine Cleavage System
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle