YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE09524
Organism: Caenorhabditis elegans
Length: 496 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE09524.

Description E-value Query
Range
Subject
Range
gi|38174419, gi|... - gi|45360609|ref|NP_988977.1| signal recognition particle 54 [Xenopus (Silurana) tropicalis], gi|3817...
436.0 [0..1] [494..1]

Back

Predicted Domain #1
Region A:
Residues: [1-496]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLADLGRKI RNAIGKLGQS TVINEGELDL MLKEVCTALI ESDVHIRLVK QLKDNVKKAI  60
   61 NFEEIVGGAN KRRYIQKTVF NELLKLVDPG VTPFTPTKGR RNVFMFVGLQ GSGKTTTCTK 120
  121 MAYYYQRKGW KTCLICADTF RAGAFDQLKQ NATKARIPFY GSYSEIDPVK IAAEGVEKFT 180
  181 QEGFEIIIVD TSGRHKQEAS LFEEMLQVSN AVTPDNVVFV MDASIGQACE AQARAFSQTV 240
  241 DVASVIITKL DSHAKGGGAL SAVAVTKSPV IFIGTGEHID DFEIFKPKSF VQKLLGMGDI 300
  301 AGLVDMVNDI GIQDNKELVG RLKQGQFTLR DMYEQFQNIM KMGPFSQIMG MIPGFGSEFM 360
  361 TKGNEQESVN RLKRMMTVMD SMSDKELDHP KASELFTKEP NRVARVARGS GSHQQEVRDL 420
  421 LAQYKKFSDV VKKIGSIKGL FNGKNGDINP KNMNPAKMAQ LNQQMAKMMD PRVLQQMGGM 480
  481 GGLQNMMQQM ARAGKM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 120.0
Match: 2j37W
Description: No description for 2j37W was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle