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View Structure Prediction Details

Protein: CE09449
Organism: Caenorhabditis elegans
Length: 451 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE09449.

Description E-value Query
Range
Subject
Range
gi|20808521, gi|... - gi|20808521|ref|NP_623692.1| NADH:flavin oxidoreductase [Thermoanaerobacter tengcongensis MB4], gi|2...
gi|20808521 - gi|20808521|ref|NP_623692.1| NADH:flavin oxidoreductase, Old Yellow Enzyme family [Thermoanaerobacte...
397.0 [0..13] [450..5]

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Predicted Domain #1
Region A:
Residues: [1-451]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLRRFPHAE IVSPDVLGEH LKFRNGRETN NRFLKSALTE IQSNYYPNEP KRHGLPTDTI  60
   61 LNIYDKWGNG NFGMILTSNV LVDPTNLEAA GNAIIFKEGD CHERRALFTY WAKLMKQDGA 120
  121 LAVIQLSHAG RQTPEFVNPT PWSASDVQLV SATRMTTYGK PKPLSIEQIK TEVVDRFVYA 180
  181 AKFAYECGFD GIEIHGANGY LLSQFTSPTT NKRTDKYGGS LENRQRIVIE VYDAIRAEIP 240
  241 ASTGFLVGIK TNSVEFQSEG LTLEDAKIMC QVYEDKGVDF VELTGGTFEK LNWTWDREST 300
  301 KKREAFFAEF AEQIRPVFNK TVVYLTGGFR TVSAMINAIS CNATQGIGLG RPITAEPDLP 360
  361 KKILEGKAIS AVQDSFNPND IATTVMASGT QMDQMGRTNM EKAGGNIMHL ITDFSDEHTV 420
  421 QRFSEALGLH VKQAALDISE GKIPKAIIAF N

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 101.0
Match: 1ps9A
Description: The Crystal Structure and Reaction Mechanism of E. coli 2,4-Dienoyl CoA Reductase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 2.31793084876503 bayes_pls_golite062009
oxidoreductase activity 1.59709503080261 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle