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View Structure Prediction Details

Protein: CE09448
Organism: Caenorhabditis elegans
Length: 457 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE09448.

Description E-value Query
Range
Subject
Range
gi|20808521, gi|... - gi|20808521|ref|NP_623692.1| NADH:flavin oxidoreductase [Thermoanaerobacter tengcongensis MB4], gi|2...
gi|20808521 - gi|20808521|ref|NP_623692.1| NADH:flavin oxidoreductase, Old Yellow Enzyme family [Thermoanaerobacte...
369.0 [0..13] [455..5]

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Predicted Domain #1
Region A:
Residues: [1-457]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASRFCDNL TVSSKILGEQ LNFRNGKTAQ NRFLKAALTE RVSTYDPENP KKHGLPTNFI  60
   61 LNLYDKWGHG KFGTILTGNV LVDPTNLESA GNAIIFKEGD GEERRALFTQ WAKNMKQDGA 120
  121 LAVVQLSHGG RQTPITVEPN PWSASDVKLS GERRFTAFGQ PVPLSTEQIK TQIIDRFVYA 180
  181 AKFAYETGFD GVELHGAHGY LLAQFTSPTT NKRTDQYGGS IENRQRIILE IYDAIRAEIP 240
  241 ESTGFMVGIK TNSVEFQEQG TTVDDAKVMC QVYEDKGFDF VELSGGTYEK LAFHHMRDST 300
  301 RNREAFFLEF AEKIRPVFKK TVVYLTGGFR TVKAMVEAIE NGATQGIGLG RPITAEPDLP 360
  361 KKIIEGLVAS SIKNALDEND FGITNLASNT QMQQMGRTTY QQTNQTPTYG ISDFSNEETV 420
  421 NRYKEALKDY TVFMKSMASQ NKPIHGVLVF EGIKQEA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 91.69897
Match: 1ps9A
Description: The Crystal Structure and Reaction Mechanism of E. coli 2,4-Dienoyl CoA Reductase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 2.31793084876503 bayes_pls_golite062009
oxidoreductase activity 1.59709503080261 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle