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View Structure Prediction Details

Protein: CE09380
Organism: Caenorhabditis elegans
Length: 457 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for CE09380.

Predicted Domain #1
Region A:
Residues: [1-223]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNKTWIFDA INQWFNDDIP GLIGSLQRLP SGSENGGTGS SFFRRGMMSN ESESSAHDDK  60
   61 VIKKQPETSS SSPEHRSPRR SKSAPPSSSN PPASASTFLE TVKNWFSCST KPPVTCRTEF 120
  121 TELEARPAIP PLGNLEGLTD SPTPRTPVNQ GPSLPYAGGR EALGIPFMDR TPSDTERTDE 180
  181 ASTSSRLPTG TTGSGITFPA NKNNDSDKAS QASVDSDLKR ETQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [224-293]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IPNYPRRRPD SDPPGGRVTS PSDVQSGASS HTRESDETPD ISADGAKKLD NITEESGTPE  60
   61 EELMSGRDSE 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [294-457]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DEGLRRKRPK LQVEGKDVKR SDCYSPSECS TQPSSGSSTA LIVPTKAGKS SDDLRKARAD  60
   61 RKAEQKAEKA RKRPSNPSEK KLTSAEKLMA ASNIPKDVSP ATNAVLLDKL HDNMAGYGKV 120
  121 DDVDEDAGDG QGSSDKNNKD DEDDDDSIFG KVVKDYEDNL FDLF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle