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View Structure Prediction Details

Protein: CE09190
Organism: Caenorhabditis elegans
Length: 419 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE09190.

Description E-value Query
Range
Subject
Range
gi|39595770, gi|... - gi|39595770|emb|CAE67273.1| Hypothetical protein CBG12721 [Caenorhabditis briggsae], gi|187029314|em...
gi|157747675 - gi|157747675|ref|XP_001668932.1| Hypothetical protein CBG12721 [Caenorhabditis briggsae AF16]
226.0 [0..50] [417..17]

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Predicted Domain #1
Region A:
Residues: [1-419]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLVDEKLEK RSSSSSLDRF LPDLPQKVKS RRKMRKIMCF VGLFGISTIF FIAVSNISSS  60
   61 EDVPLYNGNI YDPERDSKSF RILLVGDTGG IPILETTWAQ NEVKQTMASL ADEHSVQMIL 120
  121 NMGDNIYFTG PTDEFDPRFE SRFENVYTNP SLQVPWLTIA GNHDHFGNVT AEIEYTKHSK 180
  181 KWYFPSLYYK KSVEFNGTSI DFLMIDTISL CGNTKDIQNA GFIEMLRNES HDPRGPVNIT 240
  241 AAEEQWAWLE NNLEASSAQY LIISGHYPVH SMSSHGPTDC LRQRLDPLLK RFNVNAYFSG 300
  301 HDHSLQHFTF PGYGEHIINY VVSGAASRAD ASTKHIKEFS RDTLKFNYPE KSWFSWSPVS 360
  361 QLGFRKGGLI YAEFGHYNAR LDFFDKRGKQ LYSTIIPTRV IPTDTSTRST ASPFVEIGM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 47.221849
Match: 1warA
Description: Recombinant Human Purple Acid Phosphatase expressed in Pichia Pastoris
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle