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View Structure Prediction Details

Protein: egl-21
Organism: Caenorhabditis elegans
Length: 472 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for egl-21.

Description E-value Query
Range
Subject
Range
gi|157758565 - gi|157758565|ref|XP_001671626.1| Hypothetical protein CBG08337 [Caenorhabditis briggsae AF16]
gi|39583691, gi|... - gi|39583691|emb|CAE63795.1| Hypothetical protein CBG08337 [Caenorhabditis briggsae], gi|187032708|em...
369.0 [0..1] [472..1]

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Predicted Domain #1
Region A:
Residues: [1-472]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLHAMRPVLL VAALLAVTAH AFLGFGSGST HKDDAEWGHY HNQAQLEAKL GEINEKCPEI  60
   61 TTLYEIGQSV EGRPLVVIQF STTPGEHIPT KPEVKLIGNM HGNEPIGREL LLRFAETLCN 120
  121 GAINNDKEIV QLLNSTSIHI LPSMNPDGFE LALGTEPAQR QWLTGRSNIN GVDLNRDFPD 180
  181 LDSIFYELQK IGVPKFDHLL SLFEDNVDRQ PETIAVGQWT LSLPFVLSAN FHEGDLVANY 240
  241 PFDAAIDENS QKTAYSASPD DGTFRWLAKS YADNHAHMSK NDHAPCDGTS QDAFARQGGI 300
  301 TNGAKWYSVA GGMQDFNYLA TNAMEITLEL SCEKMPEGSQ LPRFWEDNQK SIFEYVWKSH 360
  361 SGVKGMVVDA MTGEPIKRAV VWIRNGTETV PVKHPVTTWS EGDFYRVLPA GKYEIIVAAE 420
  421 GYDIAAKNVT VENKVRDSAL VVNFALSPAA DEPSENEQEQ IAELVNEIAR RR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 86.39794
Match: 2nsmA
Description: No description for 2nsmA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle