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View Structure Prediction Details

Protein: tap-1
Organism: Caenorhabditis elegans
Length: 386 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tap-1.

Description E-value Query
Range
Subject
Range
PP2C2_SCHPO - Protein phosphatase 2C homolog 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ptc2 PE=3...
ptc2 - protein phosphatase 2C Ptc2
210.0 [0..1] [367..1]

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Predicted Domain #1
Region A:
Residues: [1-386]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDDGFLDQY PANTDAGIGT VHSCRYSKQK NPVQNNDFLS CSMCIHNGPI KLYGIFSGFN  60
   61 GGDSTAKFVM NRLVYEIFGE NPITPTLLPY QVVEEFKRKF ENVAERYLLM NTDDLNNRLL 120
  121 KLEEQSETGN NAVSEINQKI RQGTTAIVVM IINQDLYVLN CGNSLAIAMN SENVVQLNSN 180
  181 LHNNDNPLEI VRIKGLGINP ETVLNPTRAI GDLQRTHLFE ETEAFKNAKG PPVISTPDVQ 240
  241 YTKIDPSWRH LVLISDGVVQ NLKEVEVENI PTEVSVRLIE DHTVTSTAQA LVDSFARKHR 300
  301 DAYTMSDDKN FCISNHREEM TVIYVKLEED YQAALYEQFD SAISTMESTN ATLYEPCSTP 360
  361 YVDATNFNSG KNYEKMKKLL LTRPSK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 41.045757
Match: 2j4oA
Description: No description for 2j4oA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle