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View Structure Prediction Details

Protein: acdh-5
Organism: Caenorhabditis elegans
Length: 442 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for acdh-5.

Description E-value Query
Range
Subject
Range
gi|77996195, gi|... - gi|78044080|ref|YP_360183.1| butyryl-CoA dehydrogenase [Carboxydothermus hydrogenoformans Z-2901], g...
482.0 [0..55] [437..1]

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Predicted Domain #1
Region A:
Residues: [1-442]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFQALLTKLK NNAALGAAAN NLNKFRSSNL GNQRRSVSVA VTSTSPKSEK PVAREHMIYD  60
   61 ETHFVMQKSL GKLIEEKINP NVAKWEQDGR YPAHLVFKML GDHGVFGVNK PEAFGGTGTD 120
  121 IAMATAIAEQ MGAINCGSIP MSVMVQTDMS TPALAQFGSD ALRERFLRPS ITGDLVSSLA 180
  181 VSEPHAGSDV SAVHTHARRQ GSDLIINGSK MWITNGGQAD WACVLVNTSN TSNVHKNKSL 240
  241 VCVPLDAVGV HRSTPLDKLG MRSSDTVQLF FEDVRVPSSY IIGEEGRGFG YQMKQFNDER 300
  301 LVTVAVGLLP LQKCIDETIE YARDRLLFGK TLLDQQYIQF QLAELEAELE ATRALLYRTV 360
  361 LARSRGDDVS MLTAMAKLKI GRLARAITDQ CLQVWGGAGY LNENGISRAF RDFRLFSIGA 420
  421 GCDEVMMRII HKAQSRRQLK KA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 122.0
Match: 1jqiA
Description: Butyryl-CoA dehydrogenase, C-domain; Butyryl-CoA dehydrogenase, NM domains
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle