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View Structure Prediction Details

Protein: CE08426
Organism: Caenorhabditis elegans
Length: 458 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE08426.

Description E-value Query
Range
Subject
Range
gi|111281550, gi... - gi|120611285|ref|YP_970963.1| FtsH peptidase [Acidovorax avenae subsp. citrulli AAC00-1], gi|1205897...
267.0 [0..32] [458..137]

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Predicted Domain #1
Region A:
Residues: [1-458]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDMEVDEAIS GTSSSRLAPI EEVKPTPKQI KRIAAHSHVK GLGIDTETQE AHYEAAGFVG  60
   61 QAPARTAASI VVDMIRLKCM AGRAVLIAGP PATGKTAIAL AMSQELGDGV PFVPLVASEV 120
  121 FSNEVKKTEV LMRSFRRAIG LRVKETKDVY EGEVTELSPV EASDNSGMGK TISHLVLSLK 180
  181 TAKGSKQLKL DPSIYDSILK QRVEVGDVIY IEANSGIVKR VGRCDVYASE FDLEADEFVP 240
  241 MPKGDVRKSK DIVQNVSLHD LDIANARPQG RQGDVSNIVS QLMTPKKTEV TDRLRSEINK 300
  301 VVNEYIESGV AELMPGVLFI DEVHMLDVEC FTYLYRALES PMAPVVVFAT NRGTTTVRGL 360
  361 GDKAPHGIPP EMLDRLMIIP TMKYNEEDIR KILVHRTEAE NVQFEEKAFD LLTRLCAQTC 420
  421 GREVIEVEDV DRCTKLFMDR GESLKKAEEE MRQPKNKK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 68.69897
Match: 2c9oA
Description: No description for 2c9oA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle