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View Structure Prediction Details

Protein: CE08242
Organism: Caenorhabditis elegans
Length: 348 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE08242.

Description E-value Query
Range
Subject
Range
CE15783 - status:Partially_confirmed UniProt:O17784 protein_id:CAB07352.1
324.0 [0..1] [336..38]

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Predicted Domain #1
Region A:
Residues: [1-348]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVHSIVVHSK MFRVFYPPAV LHFNSTEHFL SSNLASPSRL GNHIFEFASL FGLSERLHRT  60
   61 PLFLVENEFH QKMLDETRKV MPGLVEKFTV INGSLPKSIK QTPFQKVCCR HENPEILEKI 120
  121 DEKYLHLTGM FYQSWKYFPN MREQLLDFLD DSSQDFGNLP RSNQRTHVTC VHARRGDFVD 180
  181 VGFQAADPDF IRNSVKYIAE NFIPEIEYKK VHRKVVIFGD DLEFMRSLFE NSVVSTDEPE 240
  241 YMFPAEYYIS QNSPAEDLTY SKQNCDIVLI SAPKSTFGWW IGYFSKGNKV FYRDIRYAKD 300
  301 RGYVSTHISK TAITIFKKTF FAQLCNFGPF LVQSLRLSIP GLRTNKRE

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.69
Match: 2hhcA
Description: No description for 2hhcA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle